CDS

Accession Number TCMCG016C04128
gbkey CDS
Protein Id OMO97544.1
Location complement(join(3696..4079,4464..4514,4591..4637,5198..5361,5847..5946,6483..6549,7795..7931,9730..9763,10033..10317))
Organism Corchorus capsularis
locus_tag CCACVL1_04516

Protein

Length 422aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01007207.1
Definition Tetratricopeptide-like helical [Corchorus capsularis]
Locus_tag CCACVL1_04516

EGGNOG-MAPPER Annotation

COG_category S
Description Small glutamine-rich tetratricopeptide repeat-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
ko04516        [VIEW IN KEGG]
KEGG_ko ko:K16365        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007029        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009895        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030162        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0030433        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031330        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032434        [VIEW IN EMBL-EBI]
GO:0032435        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034976        [VIEW IN EMBL-EBI]
GO:0036503        [VIEW IN EMBL-EBI]
GO:0042176        [VIEW IN EMBL-EBI]
GO:0042177        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043621        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0045048        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045861        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051205        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0061136        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071816        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072657        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0090150        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901799        [VIEW IN EMBL-EBI]
GO:1903050        [VIEW IN EMBL-EBI]
GO:1903051        [VIEW IN EMBL-EBI]
GO:1903069        [VIEW IN EMBL-EBI]
GO:1903070        [VIEW IN EMBL-EBI]
GO:1903362        [VIEW IN EMBL-EBI]
GO:1903363        [VIEW IN EMBL-EBI]
GO:1903573        [VIEW IN EMBL-EBI]
GO:1904292        [VIEW IN EMBL-EBI]
GO:1904293        [VIEW IN EMBL-EBI]
GO:1905897        [VIEW IN EMBL-EBI]
GO:2000058        [VIEW IN EMBL-EBI]
GO:2000059        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTTCTTTTCTCTCTCTATTATGTAGTTGAACCTGCCCCAGGGGTTGATCTTGAAGGCCTTGAAGTTGCCAGGGAATGTTTGACAGAGGTTTTTAAACTTGACTCGGCTTCTATAAATGATGTGAAACCTGATATATTAGTTGACTTATTTAGTTCATTGGAAACAACTAAGGATCAGAGAATTCAATCAGATATTAGTAACAGGGGAGCTTCTGATAATGTCCCTAGTTCATCATCTCCCCATGATGTCAATCGTGCTAATTCCACGGAGGCATCAAAAATGGAGGATAATTGGACCAGAGAACCTCAGTCTGCAGGGCTCTGTAAGGATGAACTCTTTGGGCAATTCTTTGCTGCACTAGAGAAAATTCACTTTTTTAGGGCCCTGCCTGATGGGAATGACGATCCTTCCCAACTGGATAAAGCTTCTCGTTTATTTCAAGATGCAGTAAACGAGATGGAAAGATCTGGATGTCAAGCATTTGACCGTAAAAACCTAGCTGAGACCTTTAAATCTCAAGGTAACAGGGCAATGCAGTCAAAGCAGTATACTGATGCAATAGAGCTGTATTCTATCGCGGTTTCACTTTGCGATAATAATGCAGTCTATTATTGTAATAGGGCAGCAGCTTACACTCAAGTTCACAAGCACACTGAAGCCATTAGAGATTGTCTTAAATCCATTGAAATTGACCCCAATTACAGCAAGGCATATAGTCGTCTTGGTTTAGTATATTATGCTCAAGGCAATTATGCTGATGCAATCGAGAAAGGATTTAAGAAAGCCTTGCGATTGGATCCGAACAATGAATCTGTGAAAGAAAATATTTGGGTAGCTGAACAGAAGTTGAAAGCTGAGCAGCAGAGGGCAGAGTGGGATAGGAATGCTAGTTCCAGTCACAGTAATCAAGGATCTAATAACCATTCAACTGGGTCAAGTGGTCATGGTTCATCATCTTCATTTACTATGCCTTTTGACACTAGTGCACTTCCTTCTGATTTTGCGAGCATGTTTAGGAATATGGTGGGAAGTGCATACCAGGGACAACCATCTCAAAACAGGCAGGGAGAAGACGTTAACCCTAATGGATCTGAAGAGCCTGGAATAAGATTAGGTGGGAACATCAACATGAATTTTGGTGATCAAATGCAAATGCAACTACCAGAGGAGTTAACTGGAGCTTTCAGATCTGTGATGGAAATGTTCTCAGGTTCACCACCTCATGGAAACCCTCAGGATACAAATGGAAGATCAGCTCCAAGCTAA
Protein:  
MVLFSLYYVVEPAPGVDLEGLEVARECLTEVFKLDSASINDVKPDILVDLFSSLETTKDQRIQSDISNRGASDNVPSSSSPHDVNRANSTEASKMEDNWTREPQSAGLCKDELFGQFFAALEKIHFFRALPDGNDDPSQLDKASRLFQDAVNEMERSGCQAFDRKNLAETFKSQGNRAMQSKQYTDAIELYSIAVSLCDNNAVYYCNRAAAYTQVHKHTEAIRDCLKSIEIDPNYSKAYSRLGLVYYAQGNYADAIEKGFKKALRLDPNNESVKENIWVAEQKLKAEQQRAEWDRNASSSHSNQGSNNHSTGSSGHGSSSSFTMPFDTSALPSDFASMFRNMVGSAYQGQPSQNRQGEDVNPNGSEEPGIRLGGNINMNFGDQMQMQLPEELTGAFRSVMEMFSGSPPHGNPQDTNGRSAPS